Auteurs : Ts A. Padvitski ; D V Galinousky ; N V Anisimova ; G Ya Baer ; Ya V. Pirko ; A I Yemets ; L V Khotyleva ; Ya B. Blume ; A V Kilchevsky
Source :
- TSitologiia i genetika [ 0564-3783 ]
Descripteurs français
- KwdFr :
- Arabidopsis (classification), Arabidopsis (génétique), Arabidopsis (métabolisme), Eucalyptus (classification), Eucalyptus (génétique), Eucalyptus (métabolisme), Famille multigénique (MeSH), Feuilles de plante (génétique), Feuilles de plante (métabolisme), Fruit (génétique), Fruit (métabolisme), Glucosyltransferases (génétique), Glucosyltransferases (métabolisme), Génome végétal (MeSH), Isoenzymes (génétique), Isoenzymes (métabolisme), Phaseolus (classification), Phaseolus (génétique), Phaseolus (métabolisme), Phylogenèse (MeSH), Populus (classification), Populus (génétique), Populus (métabolisme), Protéines végétales (génétique), Protéines végétales (métabolisme), Racines de plante (génétique), Racines de plante (métabolisme), Régulation de l'expression des gènes végétaux (MeSH), Soja (classification), Soja (génétique), Soja (métabolisme), Spécificité d'espèce (MeSH), Spécificité d'organe (MeSH), Séquençage nucléotidique à haut débit (MeSH), Tiges de plante (génétique), Tiges de plante (métabolisme), Transcriptome (MeSH).
- MESH :
- génétique : Arabidopsis, Eucalyptus, Feuilles de plante, Fruit, Glucosyltransferases, Isoenzymes, Phaseolus, Populus, Protéines végétales, Racines de plante, Soja, Tiges de plante.
- métabolisme : Arabidopsis, Eucalyptus, Feuilles de plante, Fruit, Glucosyltransferases, Isoenzymes, Phaseolus, Populus, Protéines végétales, Racines de plante, Soja, Tiges de plante.
- Famille multigénique, Génome végétal, Phylogenèse, Régulation de l'expression des gènes végétaux, Spécificité d'espèce, Spécificité d'organe, Séquençage nucléotidique à haut débit, Transcriptome.
English descriptors
- KwdEn :
- Arabidopsis (classification), Arabidopsis (genetics), Arabidopsis (metabolism), Eucalyptus (classification), Eucalyptus (genetics), Eucalyptus (metabolism), Fruit (genetics), Fruit (metabolism), Gene Expression Regulation, Plant (MeSH), Genome, Plant (MeSH), Glucosyltransferases (genetics), Glucosyltransferases (metabolism), High-Throughput Nucleotide Sequencing (MeSH), Isoenzymes (genetics), Isoenzymes (metabolism), Multigene Family (MeSH), Organ Specificity (MeSH), Phaseolus (classification), Phaseolus (genetics), Phaseolus (metabolism), Phylogeny (MeSH), Plant Leaves (genetics), Plant Leaves (metabolism), Plant Proteins (genetics), Plant Proteins (metabolism), Plant Roots (genetics), Plant Roots (metabolism), Plant Stems (genetics), Plant Stems (metabolism), Populus (classification), Populus (genetics), Populus (metabolism), Soybeans (classification), Soybeans (genetics), Soybeans (metabolism), Species Specificity (MeSH), Transcriptome (MeSH).
- MESH :
- chemical , genetics : Glucosyltransferases, Isoenzymes, Plant Proteins.
- classification : Arabidopsis, Eucalyptus, Phaseolus, Populus, Soybeans.
- genetics : Arabidopsis, Eucalyptus, Fruit, Phaseolus, Plant Leaves, Plant Roots, Plant Stems, Populus, Soybeans.
- metabolism : Arabidopsis, Eucalyptus, Fruit, Glucosyltransferases, Isoenzymes, Phaseolus, Plant Leaves, Plant Proteins, Plant Roots, Plant Stems, Populus, Soybeans.
- Gene Expression Regulation, Plant, Genome, Plant, High-Throughput Nucleotide Sequencing, Multigene Family, Organ Specificity, Phylogeny, Species Specificity, Transcriptome.
Abstract
The transcriptomes from different organs and tissues of western poplar, eucalyptus, soybean and common bean were studied. The expression level of cellulose synthase genes was notably different in different types of tissues and organs in studied plants. For common bean and eucalyptus transcriptome the domination of certain cellulose synthase genes was typical. These prevailing genes made up more than 50 % of the total expression pull of cellulose synthases. On the contrary, cellulose synthase expression pulls of wes-tern poplar and soybean were distributed between multiple genes. The different expression strategies of CesA-genes may reflect a phylogenetic processes that occurred in genomes studied.
PubMed: 30484606
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Blume</name></author><author><name sortKey="Kilchevsky, A V" sort="Kilchevsky, A V" uniqKey="Kilchevsky A" first="A V" last="Kilchevsky">A V Kilchevsky</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017 Jan-Feb</date><idno type="RBID">pubmed:30484606</idno><idno type="pmid">30484606</idno><idno type="wicri:Area/Main/Corpus">001502</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001502</idno><idno type="wicri:Area/Main/Curation">001502</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001502</idno><idno type="wicri:Area/Main/Exploration">001502</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en"></title><author><name sortKey="Padvitski, Ts A" sort="Padvitski, Ts A" uniqKey="Padvitski T" first="Ts A" last="Padvitski">Ts A. 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(métabolisme)</term><term>Spécificité d'espèce (MeSH)</term><term>Spécificité d'organe (MeSH)</term><term>Séquençage nucléotidique à haut débit (MeSH)</term><term>Tiges de plante (génétique)</term><term>Tiges de plante (métabolisme)</term><term>Transcriptome (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Glucosyltransferases</term><term>Isoenzymes</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Arabidopsis</term><term>Eucalyptus</term><term>Phaseolus</term><term>Populus</term><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Arabidopsis</term><term>Eucalyptus</term><term>Fruit</term><term>Phaseolus</term><term>Plant Leaves</term><term>Plant Roots</term><term>Plant Stems</term><term>Populus</term><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Arabidopsis</term><term>Eucalyptus</term><term>Feuilles de plante</term><term>Fruit</term><term>Glucosyltransferases</term><term>Isoenzymes</term><term>Phaseolus</term><term>Populus</term><term>Protéines végétales</term><term>Racines de plante</term><term>Soja</term><term>Tiges de plante</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Arabidopsis</term><term>Eucalyptus</term><term>Fruit</term><term>Glucosyltransferases</term><term>Isoenzymes</term><term>Phaseolus</term><term>Plant Leaves</term><term>Plant Proteins</term><term>Plant Roots</term><term>Plant Stems</term><term>Populus</term><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Arabidopsis</term><term>Eucalyptus</term><term>Feuilles de plante</term><term>Fruit</term><term>Glucosyltransferases</term><term>Isoenzymes</term><term>Phaseolus</term><term>Populus</term><term>Protéines végétales</term><term>Racines de plante</term><term>Soja</term><term>Tiges de plante</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Gene Expression Regulation, Plant</term><term>Genome, Plant</term><term>High-Throughput Nucleotide Sequencing</term><term>Multigene Family</term><term>Organ Specificity</term><term>Phylogeny</term><term>Species Specificity</term><term>Transcriptome</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Famille multigénique</term><term>Génome végétal</term><term>Phylogenèse</term><term>Régulation de l'expression des gènes végétaux</term><term>Spécificité d'espèce</term><term>Spécificité d'organe</term><term>Séquençage nucléotidique à haut débit</term><term>Transcriptome</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The transcriptomes from different organs and tissues of western poplar, eucalyptus, soybean and common bean were studied. The expression level of cellulose synthase genes was notably different in different types of tissues and organs in studied plants. For common bean and eucalyptus transcriptome the domination of certain cellulose synthase genes was typical. These prevailing genes made up more than 50 % of the total expression pull of cellulose synthases. On the contrary, cellulose synthase expression pulls of wes-tern poplar and soybean were distributed between multiple genes. The different expression strategies of CesA-genes may reflect a phylogenetic processes that occurred in genomes studied.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">30484606</PMID><DateCompleted><Year>2019</Year><Month>02</Month><Day>19</Day></DateCompleted><DateRevised><Year>2019</Year><Month>03</Month><Day>20</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0564-3783</ISSN><JournalIssue CitedMedium="Print"><Volume>51</Volume><Issue>1</Issue><PubDate><MedlineDate>2017 Jan-Feb</MedlineDate></PubDate></JournalIssue><Title>TSitologiia i genetika</Title><ISOAbbreviation>Tsitol Genet</ISOAbbreviation></Journal><ArticleTitle></ArticleTitle><Pagination><MedlinePgn>12-24</MedlinePgn></Pagination><Abstract><AbstractText>The transcriptomes from different organs and tissues of western poplar, eucalyptus, soybean and common bean were studied. The expression level of cellulose synthase genes was notably different in different types of tissues and organs in studied plants. For common bean and eucalyptus transcriptome the domination of certain cellulose synthase genes was typical. These prevailing genes made up more than 50 % of the total expression pull of cellulose synthases. On the contrary, cellulose synthase expression pulls of wes-tern poplar and soybean were distributed between multiple genes. The different expression strategies of CesA-genes may reflect a phylogenetic processes that occurred in genomes studied.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Padvitski</LastName><ForeName>Ts A</ForeName><Initials>TA</Initials></Author><Author ValidYN="Y"><LastName>Galinousky</LastName><ForeName>D V</ForeName><Initials>DV</Initials></Author><Author ValidYN="Y"><LastName>Anisimova</LastName><ForeName>N V</ForeName><Initials>NV</Initials></Author><Author ValidYN="Y"><LastName>Baer</LastName><ForeName>G Ya</ForeName><Initials>GY</Initials></Author><Author ValidYN="Y"><LastName>Pirko</LastName><ForeName>Ya V</ForeName><Initials>YV</Initials></Author><Author ValidYN="Y"><LastName>Yemets</LastName><ForeName>A I</ForeName><Initials>AI</Initials></Author><Author ValidYN="Y"><LastName>Khotyleva</LastName><ForeName>L V</ForeName><Initials>LV</Initials></Author><Author ValidYN="Y"><LastName>Blume</LastName><ForeName>Ya B</ForeName><Initials>YB</Initials></Author><Author ValidYN="Y"><LastName>Kilchevsky</LastName><ForeName>A V</ForeName><Initials>AV</Initials></Author></AuthorList><Language>eng</Language><Language>rus</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><VernacularTitle>Analysis of cellulose synthase gene expression strategies in higher plants using RNA-sequencing data.</VernacularTitle></Article><MedlineJournalInfo><Country>Ukraine</Country><MedlineTA>Tsitol Genet</MedlineTA><NlmUniqueID>0101671</NlmUniqueID><ISSNLinking>0564-3783</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D007527">Isoenzymes</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 2.4.1.-</RegistryNumber><NameOfSubstance UI="D005964">Glucosyltransferases</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 2.4.1.-</RegistryNumber><NameOfSubstance UI="C478648">cellulose synthase</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D017360" MajorTopicYN="N">Arabidopsis</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005052" MajorTopicYN="N">Eucalyptus</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005638" MajorTopicYN="N">Fruit</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="Y">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018745" MajorTopicYN="Y">Genome, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005964" MajorTopicYN="N">Glucosyltransferases</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D059014" MajorTopicYN="N">High-Throughput Nucleotide Sequencing</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007527" MajorTopicYN="N">Isoenzymes</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005810" MajorTopicYN="N">Multigene Family</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009928" MajorTopicYN="N">Organ Specificity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D027805" MajorTopicYN="N">Phaseolus</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018547" MajorTopicYN="N">Plant Stems</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013025" MajorTopicYN="N">Soybeans</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013045" MajorTopicYN="N">Species Specificity</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D059467" MajorTopicYN="N">Transcriptome</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2018</Year><Month>11</Month><Day>29</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>1</Month><Day>1</Day><Hour>0</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2019</Year><Month>3</Month><Day>21</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30484606</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list></list><tree><noCountry><name sortKey="Anisimova, N V" sort="Anisimova, N V" uniqKey="Anisimova N" first="N V" last="Anisimova">N V Anisimova</name><name sortKey="Baer, G Ya" sort="Baer, G Ya" uniqKey="Baer G" first="G Ya" last="Baer">G Ya Baer</name><name sortKey="Blume, Ya B" sort="Blume, Ya B" uniqKey="Blume Y" first="Ya B" last="Blume">Ya B. Blume</name><name sortKey="Galinousky, D V" sort="Galinousky, D V" uniqKey="Galinousky D" first="D V" last="Galinousky">D V Galinousky</name><name sortKey="Khotyleva, L V" sort="Khotyleva, L V" uniqKey="Khotyleva L" first="L V" last="Khotyleva">L V Khotyleva</name><name sortKey="Kilchevsky, A V" sort="Kilchevsky, A V" uniqKey="Kilchevsky A" first="A V" last="Kilchevsky">A V Kilchevsky</name><name sortKey="Padvitski, Ts A" sort="Padvitski, Ts A" uniqKey="Padvitski T" first="Ts A" last="Padvitski">Ts A. Padvitski</name><name sortKey="Pirko, Ya V" sort="Pirko, Ya V" uniqKey="Pirko Y" first="Ya V" last="Pirko">Ya V. Pirko</name><name sortKey="Yemets, A I" sort="Yemets, A I" uniqKey="Yemets A" first="A I" last="Yemets">A I Yemets</name></noCountry></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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